PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_213558g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 336aa    MW: 38844.1 Da    PI: 6.3942
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_213558g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.5e-06170202532
                     HHHHHHHHHHHHHHHHHHHHCTSCCC....... CS
             HLH   5 hnerErrRRdriNsafeeLrellPkas.....k 32 
                     h ++Er+RR +i++ f+ L +llP++s      
  MA_213558g0010 170 HMIAERNRRVKIKHYFSLLHSLLPHDSkhrveE 202
                     7799*********************86444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.16E-6163203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-4170197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEFKDAWDLE ADFNGSLVLP GVYTTTSNPG MMIQPDGQIA ASRDINADSM CIIDELHLYS  60
TTETSWYSNS SEDMDGFYQL DHGNIFHGHS HPQAPESTTL YRQTAFGSYL RPALSLYVKT  120
GRENSMKRCF KFLKIIDENR RELQRLSHAA NIREQHEFNA PLQNKAAFLH MIAERNRRVK  180
IKHYFSLLHS LLPHDSKHRV EELEQTNRAL AESLRVNISK KKGCTSFDQR LEEQHGTFVY  240
SSDEVVLEQS KKIPNQVDMR INVQIDPLSS PTSLMIVLLE RLRELQLEVV SVESTVQQFY  300
LEAHLLITQK VYCVPNLDFL ALYTERFESV LRYIPI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1136940.0BT113694.1 Picea glauca clone GQ03417_K22 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1163137